search

dgomezpere / msm_tfm

Development of an application to visualize, annotate and prioritize somatic variants in cancer
0 stars 0 forks source link

[vcf_etl%vcf_record] Check if `call.data` returns an `OrderedDict`. #23

Closed segarmond closed 2 years ago

segarmond commented 2 years ago

Check if the attribute .data from a call is a Dict already ordered. If that is the case renove OrderedDict() function.

segarmond commented 2 years ago

calls.data is not alphabetically ordered. We need to use the function OrderedDict().

Check code: https://github.com/dgomezpere/msm_tfm/blob/c5ae23f2900023642b9f25ee13bdcf3872615802/vcf_etl/vcf_record.py#L29-L32