dgomezpere / msm_tfm

Development of an application to visualize, annotate and prioritize somatic variants in cancer
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[vcf_pipeline%app] Implement `panoptes` for Snakemake pipeline monitoring #35

Open dgomezpere opened 2 years ago

dgomezpere commented 2 years ago

Snakemake Monitoring

Snakemake supports panoptes a server (under development) that lets you monitor the execution of snakemake workflows. Snakemake communicates with panoptes via the --wms-monitor flag. The flag specifies the ip and port where panoptes is running (e.g. --wms-monitor http://127.0.0.1:5000).

dgomezpere commented 2 years ago

Related commit: https://github.com/dgomezpere/msm_tfm/commit/ee8961d0305860be1d0d464eb8f3ddd0b9fb0722