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dib-lab / 2020-ibd

Analysis of publicly available metagenomic sequencing data from humans with IBD.
BSD 3-Clause "New" or "Revised" License
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change sgc queries to double checkpoint #10

Closed taylorreiter closed 4 years ago

taylorreiter commented 4 years ago

add checkpoint to download untar. update SGC rule to take a function as input.

Need to create a rule that checks that all output files are present after sgc.