dib-lab / 2022-database-covers

1 stars 2 forks source link

benchmark/details of run #3

Open ctb opened 1 year ago

ctb commented 1 year ago

with run.sh -

        Command being timed: "./make-db-cover.py /group/ctbrowngrp/sourmash-db/gtdb-rs214/gtdb-rs214-reps.k21.zip /group/ctbrowngrp/sourmash-db/gtdb-rs214/gtdb-rs214-k21.zip -o gtdb-rs214.k21.cover.d/ --scaled=10000 -k 21"
        User time (seconds): 2367.97
        System time (seconds): 59.89
        Percent of CPU this job got: 88%
        Elapsed (wall clock) time (h:mm:ss or m:ss): 45:32.86
        Average shared text size (kbytes): 0
        Average unshared data size (kbytes): 0
        Average stack size (kbytes): 0
        Average total size (kbytes): 0
        Maximum resident set size (kbytes): 14106420
        Average resident set size (kbytes): 0
        Major (requiring I/O) page faults: 113553
        Minor (reclaiming a frame) page faults: 28666554
        Voluntary context switches: 932139
        Involuntary context switches: 9152
        Swaps: 0
        File system inputs: 29058976
        File system outputs: 1882048
        Socket messages sent: 0
        Socket messages received: 0
        Signals delivered: 0
        Page size (bytes): 4096
        Exit status: 0