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dib-lab / charcoal

Remove contaminated contigs from genomes using k-mers and taxonomies.
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MRG: update sourmash and snakemake dependencies #239

Open ctb opened 11 months ago

ctb commented 11 months ago

Update sourmash deps to 4.8.4 and snakemake to 7.32.4.

Note: sourmash update had to deal with new LineageTuple stuff from https://github.com/sourmash-bio/sourmash/pull/2437.

Fixes #237