Open ctb opened 4 years ago
it would also give people another tool for bin classification (FBFW...) and provide a valuable checkpoint as well as a place to override taxonomy (by either editing the file or, better, adding the different classification to provided-lineages)
mentioned in #30
we could split classification from decontamination.
if we separated out classification from decontam, we could provide both lightweight (sourmash lca) and heavier (sourmash lca + GTDB-Tk) classification.
also, this would mean that just_taxonomy.py would be able to do a single pass across a genome, I think