run models multiple times, take shared intersect of matched assemblies

dib-lab / distillerycats

Find disease associations across metagenomes with k-mers using sourmash, and then recover pangenomic accessory elements using spacegraphcats.

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run models multiple times, take shared intersect of matched assemblies #11

Open taylorreiter opened 3 years ago

taylorreiter commented 3 years ago

will need to replace vita_rf.R script and optimize_rf.R script with vita_rf_seed.R and optimize_rf_seed.R scripts, and add a SEED var to the Snakefile