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dib-lab / elvers

(formerly eelpond) an automated RNA-Seq workflow system
https://dib-lab.github.io/elvers/
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fix se trim param #101

Closed bluegenes closed 5 years ago

bluegenes commented 5 years ago

@ctb I believe this fixes the single end read issue

ctb commented 5 years ago

I can confirm this fixes most of the problems - see #108, the fixes to rules/deseq2/deseq2-init-txOut.R and rules/deseq2/deseq2_params.yaml for the remaining fixes!