Script to generate dicty GPI file

dictyBase / Modware-Loader

Various data munging and loading scripts for genome database

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Script to generate dicty GPI file #110

Open ypandit opened 10 years ago

ypandit commented 10 years ago

Script to generate dicty-GPI
- Caches gene names & synonyms using Hash
- Caches Dicty-UniProt ID mapping using a Hash
Output file written as per GPI specs

coveralls commented 10 years ago

Coverage decreased (-2.82%) to 37.4% when pulling 63909215a9676eff508859e902cadcff7c12df17 on feature/dicty-gpi into 1f4746883c2a86f517d95da14a149ed3348d2fe5 on develop.

cybersiddhu commented 10 years ago

Needs cleanup.

Get rid of unnecessary private(underscore) variables. It's a class not designed with a public API, no need for polluting code with a barrage of underscore variables.
Loading the uniprot map, the code looks more complex than it should be.