dictyBase / Modware-Loader

Various data munging and loading scripts for genome database
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Error/Warning running `modware-dump dictystrain --data inventory` #155

Closed biodavidjm closed 8 years ago

biodavidjm commented 9 years ago

From all the data options available for dictystrain, inventory throws the following error/warning

$ perl modware-dump dictystrain -c config-legacy.yaml --dir whatever --data inventory

Can't call method "dbxref_id" on an undefined value at libs/perl-5.18.4@modwareDeveloper/lib/perl5/Modware/Role/Stock/Export/Strain.pm line 51.

There is an output file strain_inventory.tsv that seems to be ok, but.. it might be worthy to check what is this error all about.

All the other data are dumped without warnings or errors, i.e. strain, genotype, phenotype, publications, genes, characteristics, props, parent, plasmid