dictybase-docker / wheel-jbrowse

Source repository for docker image to run JBrowse at dictyBase
http://dictybase.org/tools/jbrowse
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Storage needs for dictyBase #1

Open cybersiddhu opened 9 years ago

cybersiddhu commented 9 years ago

Here are our needs

Data storage and backup

As it says, it is meant for backup and data could be compressed if required and needed only for emergency.

Solution: Northwestern vault. But we need to buy more space. Alternate: Amazon S3 or similar cloud based solutions.

Web accessible data storage

The data should always be available and will be constantly accessed the web applications.

Currently we have NUBIC windows server mounted as shared drive with CIFS. It is working reasonably well for GBrowse. The space is still no concern.

Concern

For multiple user access, a single shared network server might be a bottleneck. Moreover, random disk access for bam files is relatively slower than sequential access.

Alternate

The data will be used by analytical tools and will also generate temporary data files as needed.

Solution: If we use quest for computing cluster, then have to buy additional vault storage that is tied to northwestern quest. Alternate: Any cloud computing(amazon/google/rackspace etc).