DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
2016-07-26 15:46:37,111 finished circRNA detection from file AE_Chimeric.out.junction.fixed 2016-07-27 01:42:52,564 finished circRNA detection from file AF_Chimeric.out.junction.fixed 2016-07-27 06:48:51,014 finished circRNA detection from file AD_Chimeric.out.junction.fixed
There seems to be huge potential to speed up this function.
2016-07-26 15:46:37,111 finished circRNA detection from file AE_Chimeric.out.junction.fixed 2016-07-27 01:42:52,564 finished circRNA detection from file AF_Chimeric.out.junction.fixed 2016-07-27 06:48:51,014 finished circRNA detection from file AD_Chimeric.out.junction.fixedThere seems to be huge potential to speed up this function.