SJ.out.tab and BAM file requirements are not part of the documentation

dieterich-lab / DCC

DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.

https://dieterichlab.org/software/

GNU General Public License v3.0

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SJ.out.tab and BAM file requirements are not part of the documentation #23

Closed tjakobi closed 8 years ago

tjakobi commented 8 years ago

Improve the documentation so that all necessary file are documented together with folder that are automatically searched for them.

Also update the help messages of DCC to guide the user to the required files.