Closed CDieterich closed 6 years ago
The strand information is available via temporary count files. Including the strand is straightforward by modifying the combine()
function of CombineCounts.py
.
However, this will of course change the output format and may brake old downstream scripts.
Ok, we leave this for the next major release then (DCC 0.5)
Fixed by merging of 66c4d0373a2edfb19822c5bccb18255fb1151cba
Here is another problem..
Linear Skip Junctions are reported as: 1:1257311-1273665:4
Unfortunately, it is not clear from this format if the junction is in Sense or antisense to the gene locus.
Please investigate