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dieterich-lab / circtools

circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.
http://circ.tools
GNU General Public License v3.0
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Module to design siRNAs #24

Open tjakobi opened 7 years ago

tjakobi commented 7 years ago

A module to design siRNA sequences for use with circlular RNA was suggest on the SPP1738 conference and seems like a natural extension of circtools' functionality.

tjakobi commented 7 years ago

Note: take care of off-target effects, siRNA should be unique

CDieterich commented 7 years ago

https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw1325

CDieterich commented 7 years ago

I would like to push this to Version 0.3.0

Do you agree ?

tjakobi commented 7 years ago

Yes, we agreed to push this module, just forgot to update the issue correspondingly.

tjakobi commented 5 years ago

Now under review in #81