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dieterich-lab / rp-bp

Rp-Bp is a Bayesian approach to predict, at base-pair resolution, ribosome occupancy and translation.
MIT License
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find ORFs that do not start with AUG #111

Closed z626093820 closed 1 year ago

z626093820 commented 2 years ago

If I want to find ORFs that do not start with AUG, do I just need to add codons to "# This must be a list of strings. "start_codons: [ATG]"? For example:

This must be a list of strings.

start_codons: [ATG, CUG, GUG, UUG, ACG, AGG, AUC, AUU, AAG, AUA], but I can't find the predicted non-AUG starting ORFs in the example data results file, can you help me?