Changed position of 2 strings of code

[piterand]

Fixed the position of two strings of code. In the code, you trying to use the variables before the declaration.

[eboileau]

I think this piece of code was correct, see comment on #122, but you're right here we're referencing start_positions and end_positions before declaration if use_entire_profile is True. But we need to redefine both of them after the if\else block, since if False, mask_starts/mask_ends are redefined.

[piterand]

I think this piece of code was correct, see comment on #122, but you're right here we're referencing start_positions and end_positions before declaration if use_entire_profile is True. But we need to redefine both of them after the if\else block, since if False, mask_starts/mask_ends are redefined.

start_positions and end_positions used only in if block. And then they are not used anywhere else. But start_counts and end_counts we calculate after if-else block.

[eboileau]

... you're right!