digitalcytometry / cytospace

CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data
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glmGamPoi Error #87

Closed hannhat1998 closed 11 months ago

hannhat1998 commented 1 year ago

I got an error telling me to install glmGamPoi. However, when I used conda install -c bioconda bioconductor-glmgampoi to install it, I got this error.

Collecting package metadata (current_repodata.json): / DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): repo.anaconda.com:443 DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): repo.anaconda.com:443 DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): repo.anaconda.com:443 DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): repo.anaconda.com:443

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

Package libcxx conflicts for: bioconductor-glmgampoi -> libcxx[version='>=11.1.0|>=12.0.1|>=14.0.4|>=15.0.7|>=9.0.1'] bioconductor-glmgampoi -> r-rcpp -> libcxx[version='>=4.0.1']

Package openssl conflicts for: bioconductor-glmgampoi -> bioconductor-hdf5array[version='>=1.26.0,<1.27.0'] -> openssl[version='>=1.1.1l,<1.1.2a|>=1.1.1s,<1.1.2a|>=3.1.1,<4.0a0'] python=3.11 -> openssl[version='>=1.1.1s,<1.1.2a|>=1.1.1t,<1.1.2a|>=1.1.1u,<1.1.2a|>=1.1.1v,<1.1.2a|>=3.0.10,<4.0a0|>=3.0.9,<4.0a0|>=3.0.8,<4.0a0']

erinlbrown commented 1 year ago

Are you installing this into an environment with only CytoSPACE dependencies? If not, you might try a fresh environment with only those.

Best, Erin