can there have a conda env of R version

asmlgkj commented 3 weeks ago

Thans a lot devtools::install_github("digitalcytometry/cytotrace2", subdir = "cytotrace2_r")

make: *** [lib/R/etc/Makeconf:200: RcppExports.o] Error 1 ERROR: compilation failed for package ‘RcppGSL’

savagyan00 commented 2 weeks ago

Hi and thanks for using CytoTRACE 2!

We do provide a conda environment for the R package, which you can find with a conda environment file here.

To create and activate this conda environment you can follow these steps:

Install Miniconda if not already available.
(5-10 minutes) Create a conda environment with the required dependencies: conda env create -f environment_R.yml
Activate the cytotrace2 environment you just created: conda activate cytotrace2

Please let us know if this works out for you, and if you have any further questions!

asmlgkj commented 2 weeks ago

Thanks a lot. you helped me a lot

savagyan00 commented 2 weeks ago

Hi, We are glad to hear our response was helpful. Please feel free to reach out if you need further assistance or have any other questions!

digitalcytometry / cytotrace2