digitalpathologybern / hover_next_inference

Inference code for HoVer-NeXt
GNU General Public License v3.0
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Towards an efficient polygon output #6

Open eliasbaumann opened 3 weeks ago

eliasbaumann commented 3 weeks ago

Currently the polygon output function re-reads the instance map, searches for all nuclei and then creates polygons from them. This is unnecessarily slow and could be improved by properly integrating this output modality into the workflow.

(related: #4 )