When I test ploidyNGS use the file you provided, I'm getting the following error:
Traceback (most recent call last):
File "./ploidyNGS.py", line 90, in <module>
for l in pysam.idxstats(args.bam).split('\n'):
AttributeError: 'list' object has no attribute 'split'
Though I get these two files, there is no histogram in the pdf file.
diploidTest_depth100.tab
diploidTest_depth100.tab.PloidyNGS.pdf
When I test ploidyNGS use the file you provided, I'm getting the following error:
Though I get these two files, there is no histogram in the pdf file. diploidTest_depth100.tab diploidTest_depth100.tab.PloidyNGS.pdf