Bug: incorrect column classes assigned when loading autogvp output

[rjcorb]

Provide the command used or report the bug here

clinvar_stars and clinvar_clinsig columns in autogvp output are sometimes being interpreted as logical class when loading file in 04-filter_gene_annotations.R:

Rows: 174439 Columns: 16                                                                                                                                                                                                                                            
── Column specification ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
Delimiter: "\t"
chr (12): chr, ref, alt, rs_id, gene_symbol_vep, variant_classification_vep, HGVSg, HGVSc, HGVSp, autogvp_call, autogvp_call_reason, intervar_evidence
dbl  (2): start, gnomad_3_1_1_AF_non_cancer
lgl  (2): clinvar_stars, clinvar_clinsig

What version are you using?

Add error message here (if applicable)

Add Session info

Run sessionInfo() and post the output below