Closed rjcorb closed 1 year ago
Closes #171. This PR removes the criterion that prioritizes P/LP variant submissions with associated phenotypes.
Modified select-clinVar-submissions.R to remove this code chunk from script.
select-clinVar-submissions.R
Please review updated script and run select-ClinVar-submissions.R:
select-ClinVar-submissions.R
Rscript select-clinVar-submissions.R --variant_summary input/variant_summary.txt.gz --submission_summary input/submission_summary.txt.gz
No
Purpose/implementation Section
What feature is being added or bug is being addressed?
Closes #171. This PR removes the criterion that prioritizes P/LP variant submissions with associated phenotypes.
What was your approach?
Modified
select-clinVar-submissions.Rto remove this code chunk from script.What GitHub issue does your pull request address?
171
Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.
Which areas should receive a particularly close look?
Please review updated script and run
select-ClinVar-submissions.R:Rscript select-clinVar-submissions.R --variant_summary input/variant_summary.txt.gz --submission_summary input/submission_summary.txt.gzIs there anything that you want to discuss further?
No
Documentation Checklist