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diskin-lab-chop / AutoGVP

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Update wiki to include recommendation of filtering DP>0 #228

Closed rjcorb closed 9 months ago

rjcorb commented 9 months ago

Purpose/implementation Section

Briefly descibe the feature and provide meaningful references

What input data are required for this feature or analysis?

How do you plan to organise the feature or analysis - will it be a multi-function call or add to existing functions?

Who will complete the feature request (please add a GitHub handle here if relevant)?

jharenza commented 9 months ago

Related to https://gatk.broadinstitute.org/hc/en-us/articles/6012243429531-GenotypeGVCFs-and-the-death-of-the-dot

rjcorb commented 9 months ago

@jharenza I've updated the wiki at the filtering step, let me know what you think

jharenza commented 9 months ago

looks good, i just added GATK version number