copy autogvp scripts to Dockerfile

[rjcorb]

Purpose/implementation Section

What feature is being added or bug is being addressed?

Closes #231. This PR adds all AutoGVP scripts to project Dockerfile

What was your approach?

See updates to Dockerfile

What GitHub issue does your pull request address?

231

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

Confirm that scripts are loaded in latest docker image pull

Is there anything that you want to discuss further?

I have confirmed that all scripts are available in project docker container:

root@5db70bd751a3:/home/rstudio/AutoGVP# ls /rocker-build/
01-filter_vcf.sh            03-parse_vcf.sh        Dockerfile      install_github.r
02-annotate_variants_CAVATICA_input.R 04-filter_gene_annotations.R download_db_files.sh run_autogvp.sh
02-annotate_variants_custom_input.R  bcftools-1.17         install_bioc.r    select-clinVar-submissions.R

Documentation Checklist

• [ ] The function has examples to showcase the usage
• [ ] Added a vignette