Dockerfile update --> autogvp 1.0.1

[jharenza]

Purpose/implementation Section

What feature is being added or bug is being addressed?

Update dockerfile

What was your approach?

update dockerfile to R4.4, BioC 3.19; update maintainer Make this AutoGVP 1.0.1 release

What GitHub issue does your pull request address?

Closes #239

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

I pushed this image and tested using:

bash run_autogvp.sh --workflow="custom" --vcf=data/test_VEP.vcf --clinvar=data/clinvar.vcf.gz --intervar=data/test_VEP.hg38_multianno.txt.intervar --multianno=data/test_VEP.vcf.hg38_multianno.txt --autopvs1=data/test_autopvs1.txt --outdir=results --out="test_custom"

Which areas should receive a particularly close look?

Please pull the image and test

Is there anything that you want to discuss further?

no

Documentation Checklist

• [ ] The function has examples to showcase the usage
• [ ] Added a vignette