Closed jungkim2 closed 1 year ago
For some examples, where variants have PVS1 score, and based on autoPVS1, it still remains to have PVS1 score. Therefore, no Intervar adjustment should have been made. But on final output, it says "yes" for intervar_adjusted_call.
12-20879491-TA-T InterVar: Likely pathogenic PVS1=1 PS=[0, 0, 0, 0, 0] PM=[0, 1, 0, 0, 0, 0, 0] PP=[0, 0, 0, 0, 0, 0] BA1=0 BS=[0, 0, 0, 0, 0] BP=[0, 0, 0, 0, 0, 0, 0, 0]
it was passed to intervar for possible adjustment .... not necessarily underwent adjustment
For some examples, where variants have PVS1 score, and based on autoPVS1, it still remains to have PVS1 score. Therefore, no Intervar adjustment should have been made. But on final output, it says "yes" for intervar_adjusted_call.
12-20879491-TA-T InterVar: Likely pathogenic PVS1=1 PS=[0, 0, 0, 0, 0] PM=[0, 1, 0, 0, 0, 0, 0] PP=[0, 0, 0, 0, 0, 0] BA1=0 BS=[0, 0, 0, 0, 0] BP=[0, 0, 0, 0, 0, 0, 0, 0]