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scHierarchy
A toolking for cell type hierarchies: marker selection & consistent classification
Apache License 2.0
20
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Quickly extracting median
#20
vitkl
closed
12 months ago
0
adding posterior quantile
#19
vitkl
closed
1 year ago
0
deleted print statements
#18
vitkl
closed
2 years ago
0
Compatibility with scvi-tools 1.6.0+
#17
vitkl
closed
2 years ago
0
Create documentation website
#16
vitkl
opened
2 years ago
0
Fix no attribute 'layers_size'
#15
vitkl
opened
2 years ago
0
Various changes
#14
vitkl
opened
2 years ago
0
Use _get_fn_args_from_batch_prediction
#13
vitkl
opened
2 years ago
0
Adding standard dropout and gene dropout
#12
vitkl
closed
2 years ago
0
Logistic regression model with non-negative gene weights
#11
vitkl
opened
2 years ago
0
Infer tree iloc bug fix
#10
vitkl
closed
2 years ago
0
Different learning modes for Laplace sigma
#9
tulerpetontidae
closed
2 years ago
0
Deal with overfitting
#8
tulerpetontidae
opened
2 years ago
2
Prediction using posterior sampling
#7
vitkl
closed
2 years ago
1
Write toolkit for model training and comparison
#6
tulerpetontidae
closed
2 years ago
0
Cell2location model that considers cell type hierarchy when mapping
#5
vitkl
opened
2 years ago
0
Method to detect non-tree hierachy (multiple parent nodes)
#4
vitkl
opened
2 years ago
0
Consider adding gene-specific hierarchical prior for weights
#3
vitkl
closed
2 years ago
0
Implement logistic regression for cell type hierarchy and gene selection
#2
vitkl
closed
2 years ago
0
work on integration of gene selection logistic regression with hierarchy
#1
tulerpetontidae
closed
3 years ago
0