Vaccine updates - Githubissues

djgroen / facs

FACS: Flu And Coronavirus Simulator

https://facs.readthedocs.io

BSD 3-Clause "New" or "Revised" License

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Vaccine updates #31

Closed djgroen closed 1 year ago

djgroen commented 2 years ago

[x] Add vaccine_effect_time from YML as attribute in FACS.
[x] Move hard-coded mutations to YML file.
[x] Revise hospitalisation protection factor.
(add support for boosters)
[x] Put vacc duration and immunity duration in YML files.

djgroen commented 2 years ago

The changes made here will require updates to vaccinations.yml and disease_covid19.yml. Both will now need to have a field named "immunity_duration". I've defined a default of 273 days (3/4 of a year).

djgroen commented 2 years ago

I made vac duration and immunity fields in YML file, but did not push this yet...

djgroen commented 2 years ago

I have now added documentation about these features in a rudimentary way. Arindam is testing the code, so will leave this open for now.

djgroen commented 1 year ago

I believe this is now in place as intended.