How are the spots assigned to doublet_certain vs. doublet_uncertain and reject?

dmcable / spacexr

Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics

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How are the spots assigned to doublet_certain vs. doublet_uncertain and reject? #190

Open dbuszta opened 10 months ago

dbuszta commented 10 months ago

Hi there,

Was wondering how the assignment of the different spot categories works, could you explain?

Thanks in advance!