Open christelvanharen opened 10 months ago
what version of netmhcpan are you using. 4.0 is supported. 4.1 seems to be the latest. it could be that newer versions have changed the output format.
Hi, I am using version 4.1. What do you recommend?
Can you not try version 4.0 instead? https://services.healthtech.dtu.dk/services/NetMHCpan-4.0/
Hi,
I would like to use epitopepredict for my predictions. Tepitope and mhcflurry work, but netMHCpan does not. I use the same test.config file for all of the mentioned predictors. However, netMHCpan does work when I don't use epitopepredict, see result. I don't understand what I'm doing wrong here.
test.config:
test_e.fasta:
result: