add option to use pre-computed barcode counts

dms-vep / dms-vep-pipeline-3

Pipeline for analyzing deep mutational scanning (DMS) of viral entry proteins (VEPs)

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add option to use pre-computed barcode counts #142

Closed jbloom closed 3 weeks ago

jbloom commented 3 weeks ago

Add option to use pre-computed barcode counts (use_precomputed_barcode_counts) so pipeline can be entirely run from pre-calculated barcode-variant table and barcode counts within repo. Addresses this issue.