dms-vep / flu_h3_hk19_dms

Analysis of a multi-mutant, barcoded influenza H3 library in the A/HongKong/45/2019 background.
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Finalize seq runs #34

Closed fwelsh closed 1 year ago

fwelsh commented 1 year ago

Half of the pediatric sera were run at overly potent concentrations against libA, which is inconsistent with the rest of the serum selections. Here I incorporate re-sequencing of this sera against libA at better concentrations. scratch_notebooks/230605_mds_analysis and scratch_notebooks/230710_model_concentrations include updated analysis of these models, and generation of updated escape dfs for PCA/UMAP visualizations.