ref used before being initialised in Dotprep.py?

dnanexus-archive / dot

Dot: An interactive dot plot viewer for comparative genomics

https://dnanexus.github.io/dot

MIT License

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ref used before being initialised in Dotprep.py? #5

Open dfguan opened 6 years ago

dfguan commented 6 years ago

Hi Maria, there might be a bug in line 342: all_references_by_query[query_name].add(ref), and I think ref is used without initialised. Could you please check it? Thank you.

MariaNattestad commented 4 years ago

Hi! Sorry for neglecting these issues. I really need to turn on notifications on github apparently! Note that I have since left DNAnexus, and this repo will be archived soon, so I have created a fork and will attempt to maintain Dot over at https://github.com/MariaNattestad/dot. Please allow some time for me to triage the issues, but otherwise feel free to bug me with the same or new issues over there.