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dnanexus-archive / parliament2

Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
Apache License 2.0
102 stars 39 forks source link

svviz_output #87

Open gdaviduu opened 4 years ago

gdaviduu commented 4 years ago

Hello,

There seems to be nothing in the svviz_outputs.tar.gz tarball, but everything seems to have run fine until then.

In svviz_logs.tar.gz :

perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_US.UTF-8" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). Unknown option: memfree Unknown option: memfree

husamia commented 4 years ago

I observed the same as well. Using the docker image