search

dnanexus-rnd / GLnexus

Scalable gVCF merging and joint variant calling for population sequencing projects
Apache License 2.0
149 stars 38 forks source link

investigate benefits of cgranges #166

Closed mlin closed 5 years ago

mlin commented 5 years ago

https://github.com/lh3/cgranges

What's the feasibility of using this in place of the current 'skip index' scheme? Would it be practically advantageous given that gVCF records tend to be non-overlapping?