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dnanexus-rnd / GLnexus

Scalable gVCF merging and joint variant calling for population sequencing projects
Apache License 2.0
145 stars 37 forks source link

Move a few BCF helper functions into their own file #203

Closed xunjieli closed 4 years ago

xunjieli commented 4 years ago

This is a pure move, so that test/utils.cc doesn't depend on BCFKeyValueData_utils.h for some general purpose BCF helper functions.

The motivation is that users of GLnexus may have different implementation of KeyValueData, but have tests compiled with test/utils.cc.

coveralls commented 4 years ago

Coverage Status

Coverage decreased (-0.04%) to 93.384% when pulling efb25f92278cd89632ac75142481d5d2d9e8f73d on xunjieli:move_bcf_utils into 611f1c86892ab3a856a52b1e23190750bae4580c on dnanexus-rnd:master.