dnanexus-rnd / GLnexus

Scalable gVCF merging and joint variant calling for population sequencing projects
Apache License 2.0
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Fix typo AQ-->AF in error message #222

Closed VorontsovIE closed 4 years ago

VorontsovIE commented 4 years ago

It should be possible to distinguish update failure for AF/AQ now.

coveralls commented 4 years ago

Coverage Status

Coverage remained the same at 93.404% when pulling b9f9b4321793f3885cdfdb306ac5cd8c7e14e0ea on VorontsovIE:patch-1 into 12e6c5c572f160dc0db532ea6c2d8e327d743075 on dnanexus-rnd:master.

mlin commented 4 years ago

Thanks! was this an error you actually encountered (I don't think it should happen)? or just something you noticed incidentally?

VorontsovIE commented 4 years ago

The latter one. :) Actually I was just trying to understand what information genotyping is based on, and how does it deal with haploid calls, so probably I will have a pair of questions later in a separate thread (I saw one related to Strelka2).