Open xshah opened 3 years ago
Everything in the input gvcf files is loaded into the database, the bed file controls what is processed thereafter. Therefore, if you want to split up jobs e.g. by chromosome then it can be advantageous to slice up the gvcf files with tabix before using with glnexus_cli
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Does glnexus only load variants contained in the bed file into the db? or all of the variants?