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dnanexus-rnd / GLnexus

Scalable gVCF merging and joint variant calling for population sequencing projects
Apache License 2.0
137 stars 36 forks source link

deepvarinat #293

Open Tonitsk8264 opened 10 months ago

Tonitsk8264 commented 10 months ago

Sorry to bother you, I have a question, if we use Deepvarinat for SNP calling on pacbio or ONT sequencing data, can we also use glnexus for joint variant calling? Because the options for the config parameter I found are DeepVariantWGS and DeepVariantWES.