RNC field not comma-separated

dnanexus-rnd / GLnexus

Scalable gVCF merging and joint variant calling for population sequencing projects

Apache License 2.0

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Open holtgrewe opened 4 months ago

holtgrewe commented 4 months ago

The FORMAT/RNC field is encoded as a string of length two rather than a list of two caracters.

IOW, it is:

GT:RNC      ./.:II     1/1:15:1,14:1:16,4,0:..

But (arguably?) should be:

GT:RNC      ./.:I,I     1/1:15:1,14:1:16,4,0:.,.

What are your thoughts?

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