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dnanexus / UKB_RAP

Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
MIT License
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No return for 'eid'. #13

Open raminsalmas opened 1 year ago

raminsalmas commented 1 year ago

Hi, The command below doesn't work:

df_qced['FID'] = df_qced['IID']

I think there's a bug:

Bug:

fields = [fields_for_id(f)[0] for f in field_ids] + [participant.find_field(name='p20160_i0')]

Debugged:

fields = [fields_for_id(f)[0] for f in field_ids] + [participant.find_field(name='p20160_i0')] + [participant.find_field(name='eid')]

anastazie-dnanexus commented 1 year ago

Thank you for catching this. Feel free to make PR.

mkoohim commented 10 months ago

Thanks @raminsalmas for your help. I had the same issue and your comment helped me to solve it!