For dashing2 sketch --cmpout <path> or dashing2 cmp, the default distance mode was PHYLIP upper-triangular.
This didn't match Dashing and could be confusing. Now, the default output mode matches Dashing (upper-triangular, with dashes to represent the diagonal and the lower triangular.
To get the PHYLIP output, use --phylip.
Besides this, there's additional error-handling, and automatic batch-size selection based on the sketch sizes and estimated (largest) cache size.
For
dashing2 sketch --cmpout <path>
ordashing2 cmp
, the default distance mode was PHYLIP upper-triangular. This didn't match Dashing and could be confusing. Now, the default output mode matches Dashing (upper-triangular, with dashes to represent the diagonal and the lower triangular.To get the PHYLIP output, use
--phylip
.Besides this, there's additional error-handling, and automatic batch-size selection based on the sketch sizes and estimated (largest) cache size.