In order to convert a larger sequence file into a de-duplicated fasta file, you can now append F to the --greedy argument.
For example: --parse-by-seq --greedy 0.8F will perform sequence deduplication on an input file with 80% similarity threshold, and emit a fasta file as output. Omitting the F will yield only the sequence names.
In order to convert a larger sequence file into a de-duplicated fasta file, you can now append
Fto the--greedyargument.For example:
--parse-by-seq --greedy 0.8Fwill perform sequence deduplication on an input file with 80% similarity threshold, and emit a fasta file as output. Omitting the F will yield only the sequence names.