docker / cli

The Docker CLI
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No space left on device #2345

Closed lucaspompeun closed 4 years ago

lucaspompeun commented 4 years ago

I had this problem today

2020-02-18 16:11:47 INFO: [GenomePreparation 85022035748] Simulating reads finished
2020-02-18 16:19:10 INFO: [MetagenomeSimulationPipeline] Generate gold standard assembly
2020-02-18 16:19:10 INFO: [MetadataReader 6137628860] Reading file: '/output/internal/genome_locations.tsv'
2020-02-18 16:19:10 ERROR: [MetagenomeSimulationPipeline] [Errno 28] No space left on device: '/tmp/tmpcE2Ssk/tmpFnPHny' in line 106
2020-02-18 16:19:10 INFO: [MetagenomeSimulationPipeline] Metagenome simulation aborted
Exception AttributeError: "'GoldStandardAssembly' object has no attribute 'temp_merges_bam_directory'" in <bound method GoldStandardAssembly.del_ of <scripts.GoldStandar
dAssembly.goldstandardassembly.GoldStandardAssembly object at 0x7f86db3d9110>> ignored

help

thaJeztah commented 4 years ago

Please provide more information as requested in the issue-template that was shown when you opened this issue.

I'm closing this issue, because there's not enough information to act on.