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donaldsonlab / PhAT

A flexible open-source GUI-driven toolkit for photometry analysis
https://currentprotocols.onlinelibrary.wiley.com/doi/10.1002/cpz1.763
MIT License
6 stars 2 forks source link

TypeError: FileSelector.__init__() got an unexpected keyword argument 'default' #17

Open alexcwsmith opened 7 months ago

alexcwsmith commented 7 months ago

Hi, thanks for developing this, I am excited to try it out.

I am unable to load the GUI, I've tried both Option 1 (jupyter notebook) and 2 (python script) from your Current Protocols paper, and as soon as I run the PhAT_gui_script.py I get a TypeError:

TypeError: FileSelector.init() got an unexpected keyword argument 'default'

Traceback (most recent call last):
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/bokeh/application/handlers/code_runner.py", line 229, in run
    exec(self._code, module.__dict__)
  File "/d1/software/PhAT/FiberPho_Main/PhAT_gui_script.py", line 1117, in <module>
    upload_pkl_selecta = pn.widgets.FileSelector('.', default = '.pickle', only_files = True, height = 300,
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/widgets/file_selector.py", line 115, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/widgets/base.py", line 191, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/widgets/base.py", line 75, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/reactive.py", line 556, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/reactive.py", line 118, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/viewable.py", line 699, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/viewable.py", line 538, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/panel/viewable.py", line 301, in __init__
    super().__init__(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/param/parameterized.py", line 4151, in __init__
    refs, deps = self.param._setup_params(**params)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/param/parameterized.py", line 1678, in override_initialization
    ret = fn(self_, *args, **kw)
  File "/home/smith/anaconda3/envs/phat/lib/python3.10/site-packages/param/parameterized.py", line 1930, in _setup_params
    raise TypeError(
TypeError: FileSelector.__init__() got an unexpected keyword argument 'default'

Do you know what the fix for this is? Thank you very much!

BROBAR14 commented 2 days ago

Hi Alex!

I have recently begun trying to use this protocol and I am currently receiving the same error you did. I tried editing the code to circumvent the issue, however I then received the same message for a different keyword argument ('background').

I realise you never received an answer on here but I was wondering if perhaps you have managed to solve this issue and would be willing to share the solution with me.

Thank you so much, Barbara