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dondi / GRNsight

Web app and service for modeling and visualizing gene regulatory networks.
http://dondi.github.io/GRNsight
BSD 3-Clause "New" or "Revised" License
17 stars 8 forks source link

Define data model and schema for GRNs #951

Closed dondi closed 2 years ago

dondi commented 2 years ago

The schema should allow imports from other sources; it will also allow us to store our own GRN data. The model should also support multiple species in the event that we expand to those later.

dondi commented 2 years ago

Looking forward to #954, let’s seek to include a timestamp in the schema wherever it’s appropriate.

Onariaginosa commented 2 years ago

I have a preliminary schema for the network database ProposedNetwork Database Schema(1)

Onariaginosa commented 2 years ago

I have completed the preprocessing of this data and will begin working on the loader to load it into the database

dondi commented 2 years ago

Follow-up issue for this (loader) is #960