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dondi / GRNsight

Web app and service for modeling and visualizing gene regulatory networks.
http://dondi.github.io/GRNsight
BSD 3-Clause "New" or "Revised" License
17 stars 8 forks source link

Bug: When loading a network from database. If no relations are observed GRNsight crashes #990

Closed Onariaginosa closed 1 year ago

Onariaginosa commented 1 year ago

When you load a network that has no regulatory connections between genes (no edges/links) from the database, it crashes GRNsight. I fixed it while working on #978 and pulled it out to a new issue for clarification. I cannot actually submit a PR for this fix quite yet because the export to excel functionality is not fully functional at the moment. Once #978 is done, a PR will be submitted.

dondi commented 1 year ago

We don’t recall if this was verified—we can verify this alongside #995. After initializing a new database cluster but before loading the schema, run GRNsight against the empty database to check if this issue is indeed addressed

kdahlquist commented 1 year ago

@ahmad00m says he checked this and confirmed that it was fixed.