dongzhang0725
commented
2 years ago 你好像是用的密码子比对模式，报错是说你的序列不是密码子序列，可能不是3的倍数，你先检查好开放阅读框再比对。
suanhaijiao @.***> 于2022年2月24日周四 19:27写道：
老师您好！ 我在运行MAFFT的时候遇到如下报错 During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "codes\src\Lg_mafft.py", line 394, in run_command File "codes\src\Lg_mafft.py", line 470, in align File "codes\src\Lg_mafft.py", line 52, in init File "codes\src\Lg_mafft.py", line 107, in translate File "site-packages\Bio\Seq.py", line 2605, in _translate_str Bio.Data.CodonTable.TranslationError: Codon 'TA.' is invalid
感谢您的帮助！
— Reply to this email directly, view it on GitHub https://github.com/dongzhang0725/PhyloSuite/issues/47, or unsubscribe https://github.com/notifications/unsubscribe-auth/ADZXXOJBJREM3CENWMZUIKLU4YI3NANCNFSM5PHDK6OQ . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.
You are receiving this because you are subscribed to this thread.Message ID: @.***>
suanhaijiao
老师您好！ 我在运行MAFFT的时候遇到如下报错 During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "codes\src\Lg_mafft.py", line 394, in run_command File "codes\src\Lg_mafft.py", line 470, in align File "codes\src\Lg_mafft.py", line 52, in init File "codes\src\Lg_mafft.py", line 107, in translate File "site-packages\Bio\Seq.py", line 2605, in _translate_str Bio.Data.CodonTable.TranslationError: Codon 'TA.' is invalid
感谢您的帮助！