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donovan-h-parks / STAMP

Statistical Analysis of Metagenomic Profiles
GNU General Public License v3.0
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Script for along usage #26

Closed LuffyLuffy closed 4 years ago

LuffyLuffy commented 6 years ago

Hi, Denovan,

STAMP is really a nice and friendly software for statistics.

I have 13 pairs samples for two-sample fisher's exact test. Since the command line has been removed from New version, it would be really a energy-consuming work. I wonder if it possible to get a stand-along script for the analysis and figure plotting.

Although you have shared the code, however, I'm new to python, unable to extract the script for analysis repeatedly. I am only able to write some simple bash profile to run code.

It would be highly appreciated if you can offer a stand-along scripts for the test and plots.

I'll try to learn more about python code. And hopefully to help a little.

donovan-h-parks commented 6 years ago

Hello. I'm afraid I don't have a stand-alone script.